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@manual{R,
	address = {Vienna, Austria},
	author = {{R Core Team}},
	note = {{ISBN} 3-900051-07-0},
	organization = {R Foundation for Statistical Computing},
	title = {R: A Language and Environment for Statistical Computing},
	url = {https://www.R-project.org/},
	year = {2016},
	Bdsk-Url-1 = {https://www.R-project.org/}}

@article{ihaka:1996,
	author = {Ihaka, Ross and Gentleman, Robert},
	journal = {Journal of Computational and Graphical Statistics},
	number = 3,
	pages = {299--314},
	title = {R: A Language for Data Analysis and Graphics},
	url = {https://doi.org/10.1080/10618600.1996.10474713},
	volume = 5,
	year = 1996,
	Bdsk-Url-1 = {https://doi.org/10.1080/10618600.1996.10474713}}

@book{efron:2013,
	author = {Efron, Bradley},
	isbn = {9780511761362},
	publisher = {Cambridge University Press},
	title = {Large-Scale Inference: Empirical Bayes Methods for Estimation, Testing, and Prediction},
	year = 2013}

@article{bh:1995,
	author = {Benjamini, Yoav and Hochberg, Yosef},
	date-modified = {2022-04-01 11:05:03 -0500},
	journal = {Journal of the Royal Statistical Society},
	number = 1,
	pages = {289--300},
	publisher = {Wiley for the Royal Statistical Society},
	series = {B},
	title = {Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing},
	volume = 57,
	year = 1995,
	Bdsk-Url-1 = {http://www.jstor.org/stable/2346101}}

@article{shaffer:1995,
	author = {Shaffer, Juliet Popper},
	journal = {Annual review of psychology},
	number = 1,
	pages = {561--584},
	title = {Multiple Hypothesis Testing},
	volume = 46,
	year = 1995}

@article{scott:1979,
	author = {Scott, David W.},
	journal = {Biometrika},
	number = 3,
	pages = {605--610},
	title = {On optimal and data-based histograms},
	url = {https://doi.org/10.1093/biomet/66.3.605},
	volume = 66,
	year = 1979,
	Bdsk-Url-1 = {https://doi.org/10.1093/biomet/66.3.605}}

@article{storey:2003,
	author = {Storey, John D and Tibshirani, Robert},
	journal = {Proceedings of the National Academy of Sciences},
	number = {16},
	pages = {9440--9445},
	publisher = {National Acad Sciences},
	title = {Statistical significance for genomewide studies},
	volume = {100},
	year = {2003}}

@article{by:2001,
	author = {Benjamini, Yoav and Yekutieli, Daniel},
	journal = {Annals of statistics},
	pages = {1165--1188},
	publisher = {JSTOR},
	title = {The control of the false discovery rate in multiple testing under dependency},
	year = {2001}}

@article{mein:2006,
	author = {Meinshausen, Nicolai and Rice, John and others},
	journal = {The Annals of Statistics},
	number = {1},
	pages = {373--393},
	publisher = {Institute of Mathematical Statistics},
	title = {Estimating the proportion of false null hypotheses among a large number of independently tested hypotheses},
	volume = {34},
	year = {2006}}

@article{jiang:2008,
	author = {Jiang, Hongmei and Doerge, RW},
	journal = {Cancer informatics},
	pages = {117693510800600001},
	publisher = {SAGE Publications Sage UK: London, England},
	title = {Estimating the proportion of true null hypotheses for multiple comparisons},
	volume = {6},
	year = {2008}}

@article{nett:2006,
	author = {Nettleton, Dan and Hwang, JT Gene and Caldo, Rico A and Wise, Roger P},
	journal = {Journal of agricultural, biological, and environmental statistics},
	number = {3},
	pages = {337},
	publisher = {Springer},
	title = {Estimating the number of true null hypotheses from a histogram of p values},
	volume = {11},
	year = {2006}}

@article{pounds:2003,
	author = {Pounds, Stan and Morris, Stephan W},
	journal = {Bioinformatics},
	number = {10},
	pages = {1236--1242},
	publisher = {Oxford University Press},
	title = {Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values},
	volume = {19},
	year = {2003}}

@article{bon:1936,
	author = {Bonferroni, Carlo},
	journal = {Pubblicazioni del R Istituto Superiore di Scienze Economiche e Commericiali di Firenze},
	pages = {3--62},
	title = {Teoria statistica delle classi e calcolo delle probabilita},
	volume = {8},
	year = {1936}}

@article{holm:1979,
	author = {Holm, Sture},
	journal = {Scandinavian journal of statistics},
	pages = {65--70},
	publisher = {JSTOR},
	title = {A simple sequentially rejective multiple test procedure},
	year = {1979}}

@article{hoch:1988,
	author = {Hochberg, Yosef},
	journal = {Biometrika},
	number = {4},
	pages = {800--802},
	publisher = {Oxford University Press},
	title = {A sharper Bonferroni procedure for multiple tests of significance},
	volume = {75},
	year = {1988}}

@article{sidak:1967,
	author = {{\v{S}}id{\'a}k, Zbyn{\v{e}}k},
	journal = {Journal of the American Statistical Association},
	number = {318},
	pages = {626--633},
	publisher = {Taylor \& Francis},
	title = {Rectangular confidence regions for the means of multivariate normal distributions},
	volume = {62},
	year = {1967}}

@misc{murray2020false,
	archiveprefix = {arXiv},
	author = {Megan Hollister Murray and Jeffrey D. Blume},
	eprint = {2010.04680},
	primaryclass = {stat.ME},
	title = {False Discovery Rate Computation: Illustrations and Modifications},
	year = {2020}}
