Package: EpiTest
Title: Test for Gene x Gene Interactions in Bi-Parental Populations
Version: 1.0.0
Authors@R: c(
    person("Simon", "Rio", , "simon.rio@cirad.fr", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-7014-8789")),
    person("Tristan", "Mary-Huard", , "tristan.mary-huard@agroparistech.fr", role = "aut",
           comment = c(ORCID = "0000-0002-3839-9067"))
  )
Description: Provides functions to test for gene x gene interactions in a
    bi-parental population of inbred lines. The data are fitted with the
    mixed linear model described in Rio et al. (2022) <doi:10.1101/2022.12.18.520958>, 
    that accounts for gene x gene interactions
    at both the fixed effect and variance levels. The package also
    provides graphical tools to display the gene x gene interaction trend at
    the mean level and the variance component analysis.
License: GPL (>= 3)
Depends: R (>= 3.5.0)
Imports: dplyr, ggplot2, ggrepel, magrittr, MM4LMM, purrr, stringr,
        utils
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.2
NeedsCompilation: no
Packaged: 2022-12-20 06:48:51 UTC; rio
Author: Simon Rio [aut, cre] (<https://orcid.org/0000-0001-7014-8789>),
  Tristan Mary-Huard [aut] (<https://orcid.org/0000-0002-3839-9067>)
Maintainer: Simon Rio <simon.rio@cirad.fr>
Repository: CRAN
Date/Publication: 2022-12-20 12:30:02 UTC
Built: R 4.6.0; ; 2026-04-29 16:47:14 UTC; unix
