R: Detecting Epidemics using School Absenteeism

# Detecting Epidemics using School Absenteeism

## Documentation for package ‘DESA’ version 1.0.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

alarm_metrics | Create an Alarm Metrics Object
alarm_plot_data | Create Alarm Plot Data Object
best_model | Create Best Model
catchment_sim | Simulating catchment areas
compile_epi | Compile Epidemic Data
create_alarm_metrics_summary | Create Alarm Metrics Summary
elementary_pop | Create Elementary Schools population size
eval_metrics | Evaluate Alarm Metrics for Epidemic Models
plot.alarm_metrics | Plot Heatmap of Alarm Metrics
plot.alarm_plot_data | Plot Epidemic Data with Alarm Metrics
plot.ssir_epidemic | Plot method for a single SSIR epidemic simulation
plot.ssir_epidemic_multi | Plot method for multiple SSIR epidemic simulations
plot_single_epidemic | Plot a single epidemic simulation
simulate_households | Simulate total households and individuals data
ssir | Stochastic SIR simulation
subpop_children | Simulate households with children
subpop_noChildren | Simulate households without children
summary.alarm_metrics_summary | Summary of Alarm Metrics
summary.ssir_epidemic | S3 Summary method for epidemic Simulation
summary.ssir_epidemic_multi | S3 Summary method for multiple epidemic simulations