R: Interactive Genome Browser

# Interactive Genome Browser

## Documentation for package ‘D3GB’ version 2.0

- DESCRIPTION file

## Help Pages

D3GB-package | Interactive genome browsers with R
createAssembly | Creates a genome assembly for 'genomebrowser' or 'genomemap'.
D3GB | Interactive genome browsers with R
gbk2genomebrowser | Generates an interactive genome browser.
genomebrowser | Generates an interactive genome browser.
genomemap | Create an interative genome map.
genome_addGFF | Add track in a gff file to 'genomebrowser'.
genome_addSequence | Add genome sequence on Fasta format to 'genomebrowser'.
genome_addTrack | Add tracks to 'genomebrowser'.
genome_addVCF | Add VCF tracks to 'genomebrowser'.
genome_createLocalMode | Generates an interactive genome browser.
genome_createServerMode | Generates an interactive genome browser.
getAssemblyFromFasta | Create an assembly from a FASTA file for its use as parameter of 'genomebrowser' or 'genomemap'.
GRCh37 | Length of human chromosomes based on GRCh37 assembly
GRCh37.bands | Cytoband information based on GRCh37
GRCh38 | Length of human chromosomes based on GRCh38 assembly
GRCh38.bands | Cytoband information based on GRCh38
NCBI36 | Length of human chromosomes based on NCBI36 assembly
segmentation | Function for segmentate tracks in BED format.