R: Identifying Similar T Cell Receptor Hyper-Variable Sequences with 'ClusTCR2'

# Identifying Similar T Cell Receptor Hyper-Variable Sequences with 'ClusTCR2'

## Documentation for package ‘ClusTCR2’ version 1.7.3.01

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

ClusTCR | Creates ClusTCR matrix This function identifies similar CDR3 amino acid sequences based on the same length and V_gene
ClusTCR_Large | Creates ClusTCR matrix This function identifies similar CDR3 amino acid sequences based on the same length and V_gene
ggnet2 | Copied code from ggnet's ggnet2 function
mcl_cluster | Create the files for labeling the linked clusters from ClusTCR_list_to_matrix function
mcl_cluster_large | Create the files for labeling the linked clusters from ClusTCR_list_to_matrix function
Motif_from_cluster_file | Code for plotting the Motif based on a specific CDR3 length and V gene (see netplot_ClusTCR2 for details).
motif_plot | Code for plotting the Motif based on a specific CDR3 length and V gene (see netplot_ClusTCR2 for ).
motif_plot_large | Code for plotting the Motif based on a specific CDR3 length and V gene (see netplot_ClusTCR2 for details).
netplot_ClusTCR2 | Code for displaying the network.