R: Dirichlet Multinomial Modeling of Relative Abundance Data

# Dirichlet Multinomial Modeling of Relative Abundance Data

## Documentation for package ‘CNVRG’ version 1.0.0

- DESCRIPTION file
- Package README

## Help Pages

CNVRG-package | The 'CNVRG' package.
CNVRG | The 'CNVRG' package.
cnvrg_HMC | Perform Hamiltonian Monte Carlo sampling
cnvrg_VI | Perform variational inference sampling
diff_abund | Calculate features with different abundances between treatment groups
diversity_calc | Calculate diversity entropies for each replicate
extract_pi_quantiles | Extract quantiles of pi parameters
extract_point_estimate | Extract point estimates of multinomial and Dirichlet parameters
fungi | Fungal endophytes of Astragalus lentiginosus grown near Reno, NV
indexer | Determine indices for treatment groups
isd_transform | Transform data into estimates of absolute abundances using an ISD