BinMatInput_ordination
                        Example input data containing a consolidated
                        binary matrix with groups
BinMatInput_reps        Example input data containing a binary matrix
                        comprising replicate pairs
bunias_orientalis       Example input file of Bunias orientalis AFLP
                        data, taken from Tewes et. al. (2017). This
                        dataset has already been consolidated, and can
                        be used as input for the generation of an nMDS
                        plot. The paper can be found here:
                        <doi:10.1111/1365-2745.12869>
check.data              Checks binary matrix for unwanted characters.
consolidate             Consolidates replicate pairs in a binary
                        matrix.
errors                  Calculates Jaccard and Euclidean error rates.
group.names             Outputs group names specified in the input file
                        for the creation of an nMDS plot.
nmds                    Creates a non-metric multidimensional scaling
                        plot (nMDS).
nymphaea                Example input file of Nymphaea ISSR data, taken
                        from Reid et. al. (2021). This dataset has
                        already been consolidated, and can be used as
                        input for the generation of an nMDS plot. The
                        paper can be found here:
                        <doi:10.1016/j.aquabot.2021.103372>
peak.remove             Removes samples with peaks equal to or less
                        than a specified threshold value.
peaks.consolidated      Calculates peak numbers for a consolidated data
                        set (total, maximum, and minimum).
peaks.original          Calculates peak numbers for the data set with
                        all replicates (total, maximum, and minimum).
scree                   Draws a scree plot.
shepard                 Creates a shepard plot.
upgma                   Draws a hierarchical clustering tree (UPGMA).
