%*%                     Matrix multiplication for HDF5Matrix
BigDataStatMeth         BigDataStatMeth: Scalable statistical computing
                        with R, C++, and HDF5
HDF5Matrix-S3           S3 methods for HDF5Matrix
HDF5Matrix-scalar-aggregations
                        Summary statistics for HDF5Matrix
Ops.HDF5Matrix          Elementwise arithmetic operators for HDF5Matrix
                        objects
[.HDF5Matrix            Subset an HDF5Matrix
[<-.HDF5Matrix          Subsetting assignment for HDF5Matrix objects
apply_function          Apply a statistical or algebraic function to
                        HDF5 datasets (generic)
as.data.frame.HDF5Matrix
                        Convert HDF5Matrix to data.frame
as.matrix.HDF5Matrix    Convert HDF5Matrix to in-memory matrix
bdCorr_matrix           Compute correlation matrix for in-memory
                        matrices (unified function)
bdCreate_hdf5_group     Create Group in an HDF5 File
bdCreate_hdf5_matrix    Create HDF5 data file and write data to it
bdCrossprod             Efficient Matrix Cross-Product Computation
bdImportData_hdf5       Import data from URL or file to HDF5 format
bdImportTextFile_hdf5   Import Text File to HDF5
bdReduce_hdf5_dataset   Reduce Multiple HDF5 Datasets
bdScalarwproduct        Matrix–scalar weighted product
bdWrite_hdf5_dimnames   Write dimnames to an HDF5 dataset
bd_wproduct             Weighted matrix–vector products and
                        cross-products
bdapply_Function_hdf5   Apply function to different datasets inside a
                        group
bdblockMult             Block-Based Matrix Multiplication
bdblockSubstract        Block-Based Matrix Subtraction
bdblockSum              Block-Based Matrix Addition
bdgetDatasetsList_hdf5
                        List Datasets in HDF5 Group
bdmove_hdf5_dataset     Move HDF5 Dataset
bdpseudoinv             Compute Matrix Pseudoinverse (In-Memory)
bdpseudoinv_hdf5        Compute Matrix Pseudoinverse (HDF5-Stored)
bdtCrossprod            Efficient Matrix Transposed Cross-Product
                        Computation
can_allocate            Check if memory allocation is safe
cancer                  Cancer classification
cbind.HDF5Matrix        Column-bind HDF5Matrix objects
chol.HDF5Matrix         Cholesky decomposition of a symmetric
                        positive-definite HDF5Matrix
close.HDF5Matrix        Close HDF5Matrix
colMaxs                 Column and row maximums for HDF5Matrix
colMeans                Column and row means for HDF5Matrix
colMins                 Column and row minimums for HDF5Matrix
colSds                  Column and row standard deviations for
                        HDF5Matrix
colSums                 Column and row sums for HDF5Matrix
colVars                 Column and row variances for HDF5Matrix
colesterol              Dataset colesterol
cor                     Correlation (generic)
cor.HDF5Matrix          Correlation matrix for HDF5Matrix objects
crossprod               Cross product of HDF5Matrix objects
diag                    Extract or construct a diagonal for HDF5Matrix
diag<-                  Set diagonal of an HDF5Matrix (generic)
diag_op                 Diagonal-vector operation on an HDF5Matrix
diag_scale              Scalar diagonal operation on an HDF5Matrix
dim.HDF5Matrix          Dimensions of an HDF5Matrix
dimnames.HDF5Matrix     Get dimension names of an HDF5Matrix
dimnames<-.HDF5Matrix   Set dimension names on an HDF5Matrix
eigen                   Spectral decomposition
filter_low_coverage     Remove high-missingness features from an
                        HDF5Matrix
filter_maf              Remove SNPs by Minor Allele Frequency from an
                        HDF5Matrix
get_available_ram       Get available (free) system RAM
get_cpu_cores           Get number of CPU cores
get_memory_thresholds   Get dynamic memory thresholds based on system
                        RAM
get_recommended_threads
                        Get recommended number of threads for parallel
                        operations
get_total_ram           Get total system RAM
hdf5_apply              Apply a mathematical operation to multiple HDF5
                        datasets
hdf5_close_all          Close all HDF5Matrix objects
hdf5_close_file         Close all HDF5 handles for a specific file
hdf5_create_matrix      Create an HDF5 dataset and return an HDF5Matrix
                        object
hdf5_import             Import data from file or URL into HDF5 format
hdf5_import_multiple    Import multiple files into HDF5
hdf5_matrix             Open an HDF5 dataset as an HDF5Matrix object
hdf5_reduce             Reduce all datasets in an HDF5 group by a
                        binary operation
hdf5matrix_options      Set or get HDF5Matrix computation options
impute_snps             Impute missing SNP values in an HDF5Matrix
is_open                 Check if HDF5Matrix is open
length.HDF5Matrix       Length of an HDF5Matrix
list_datasets           List datasets in an HDF5 file or group
memory_info             Print system memory information
miRNA                   miRNA
multiply_sparse         Sparse-aware matrix multiplication (generic)
multiply_sparse.HDF5Matrix
                        Sparse-aware matrix multiplication for
                        HDF5Matrix
object_size             Get memory size of HDF5Matrix without loading
prcomp.HDF5Matrix       Principal Component Analysis of an HDF5Matrix
print.HDF5Matrix        Print an HDF5Matrix object
print.HDF5PCA           Print method for HDF5PCA objects
pseudoinverse           Moore-Penrose pseudoinverse
qr                      QR decomposition of an HDF5Matrix
qr.HDF5Matrix           QR decomposition of an HDF5Matrix
rbind.HDF5Matrix        Row-bind HDF5Matrix objects
reduce                  Reduce a group of HDF5 datasets by accumulation
                        (generic)
scale                   Scale / normalize an HDF5Matrix
sd                      Standard deviation of all elements of an
                        HDF5Matrix
show_hdf5matrix_options
                        Show current HDF5Matrix performance settings
solve.HDF5Matrix        Matrix inverse of a symmetric positive-definite
                        HDF5Matrix via Cholesky
split.HDF5Matrix        Split an HDF5Matrix into a list of blocks
split_dataset           Split an HDF5Matrix into multiple block
                        datasets
str.HDF5Matrix          Structure of an HDF5Matrix object
svd                     Singular Value Decomposition (generic)
svd.HDF5Matrix          Singular Value Decomposition of an HDF5Matrix
sweep                   Sweep out array summaries (generic)
sweep.HDF5Matrix        Broadcast a vector over an HDF5Matrix (sweep)
system_info             Get system information summary
tcrossprod              Transposed cross product of HDF5Matrix objects
var                     Variance of all elements of an HDF5Matrix
