Package: AnanseSeurat
Title: Construct ANANSE GRN-Analysis Seurat
Version: 1.2.0
Authors@R: c(
    person(given = "Jos", family ="Smits", email = "Jsmits@science.ru.nl", role = c("aut", "cre","cph"),
           comment = c(ORCID = "0000-0001-5858-3905")),
    person(given =c("Huiqing","Jo"),family ="Zhou", email ="Jo.Zhou@radboudumc.nl", role = c("aut","fnd","cph"),
           comment = c(ORCID = "0000-0002-2434-3986"))
  )
Description: Enables gene regulatory network (GRN) analysis on single cell clusters,
    using the GRN analysis software 'ANANSE', Xu et al.(2021) <doi:10.1093/nar/gkab598>.
    Export data from 'Seurat' objects, for GRN analysis by 'ANANSE' 
    implemented in 'snakemake'. Finally, incorporate results for visualization 
    and interpretation.
License: Apache License (>= 2)
BugReports: https://github.com/JGASmits/AnanseSeurat/issues
URL: https://github.com/JGASmits/AnanseSeurat/
Encoding: UTF-8
RoxygenNote: 7.2.3
Imports: dplyr, ggplot2, ggpubr, magrittr, patchwork, png, purrr,
        rlang, Seurat, stringr, utils,
Suggests: covr, knitr, rmarkdown, Signac, testthat (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
Depends: R (>= 3.50)
NeedsCompilation: no
Packaged: 2023-11-11 20:53:08 UTC; jossm
Author: Jos Smits [aut, cre, cph] (<https://orcid.org/0000-0001-5858-3905>),
  Huiqing Jo Zhou [aut, fnd, cph]
    (<https://orcid.org/0000-0002-2434-3986>)
Maintainer: Jos Smits <Jsmits@science.ru.nl>
Repository: CRAN
Date/Publication: 2023-11-11 21:43:17 UTC
Built: R 4.6.0; ; 2026-05-01 05:38:54 UTC; unix
