Package: APIS
Type: Package
Title: Auto-Adaptive Parentage Inference Software Tolerant to Missing
        Parents
Version: 2.0.8
Authors@R: 
  c(person(given = "Julien",
           family = "Roche",
           role = c("aut", "cre"),
           email = "julien.roche@inrae.fr"),
    person(given = "Ronan",
           family = "Griot",
           role = "aut"),
    person(given = "Mathieu",
           family = "Besson",
           role = "aut"),
    person(given = "François",
           family = "Allal",
           role = "aut"),
    person(given = "Marc",
           family = "Vandeputte",
           role = "aut"),
    person(given = "Jonathan",
           family = "D'Ambrosio",
           role = "aut"),
    person(given = "Romain",
           family = "Morvezen",
           role = "aut"),
    person(given = "Florence",
           family = "Phocas",
           role = "aut"),
    person(given = "Sophie",
           family = "Brard-Fudulea",
           role = "aut"),
    person(given = "Pierrick",
           family = "Haffray",
           role = "aut"))
Description: Parentage assignment package.
    Parentage assignment is performed based on observed average Mendelian transmission probability distributions or Exclusion.
    The main functions of this package are the function APIS_2n(), APIS_3n() and launch_APIShiny(), which perform parentage assignment.
License: GPL
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Imports: cowplot, data.table, doParallel, dplyr, DT, foreach, ggplot2,
        gridExtra, htmltools, methods, plotly, rlang, shiny,
        shinythemes
Depends: R (>= 3.5.0), shinyBS
NeedsCompilation: yes
Packaged: 2024-11-04 09:24:31 UTC; Proprietaire
Author: Julien Roche [aut, cre],
  Ronan Griot [aut],
  Mathieu Besson [aut],
  François Allal [aut],
  Marc Vandeputte [aut],
  Jonathan D'Ambrosio [aut],
  Romain Morvezen [aut],
  Florence Phocas [aut],
  Sophie Brard-Fudulea [aut],
  Pierrick Haffray [aut]
Maintainer: Julien Roche <julien.roche@inrae.fr>
Repository: CRAN
Date/Publication: 2024-11-04 09:40:02 UTC
Built: R 4.6.0; x86_64-apple-darwin20; 2026-04-30 07:05:19 UTC; unix
Archs: APIS.so.dSYM
