Package: moc.gapbk
Type: Package
Title: Multi-Objective Clustering Algorithm Guided by a-Priori
        Biological Knowledge
Version: 0.2.1
Authors@R: c(
    person("Jorge", "Parraga-Alava",
           email = "jorge.parraga@utm.edu.ec",
           role = c("aut", "cre", "cph"),
           comment = c(ORCID = "0000-0001-8558-9122")),
    person("Marcio", "Dorn", role = "aut"),
    person("Mario", "Inostroza-Ponta", role = "aut"))
Description: Implements the Multi-Objective Clustering Algorithm Guided
    by a-Priori Biological Knowledge ('MOC-GaPBK') proposed by
    Parraga-Alava and others (2018) <doi:10.1186/s13040-018-0178-4>.
    The algorithm performs gene clustering using 'NSGA-II' as the
    underlying multi-objective evolutionary engine, together with
    Path-Relinking and Pareto Local Search as intensification and
    diversification strategies. Two versions of the Xie-Beni validity
    index are used as objective functions, one per distance matrix,
    so that prior biological knowledge can be incorporated through
    the second matrix.
License: GPL-2
Encoding: UTF-8
Language: en-US
Depends: R (>= 3.5.0)
Imports: stats, utils, nsga2R, foreach, parallel, doParallel
Suggests: amap, testthat (>= 3.0.0), knitr, rmarkdown
URL: https://github.com/jorgeklz/package-moc.gapbk
BugReports: https://github.com/jorgeklz/package-moc.gapbk/issues
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/roxygen2/version: 8.0.0
NeedsCompilation: no
Packaged: 2026-05-13 21:10:01 UTC; jorge
Author: Jorge Parraga-Alava [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0001-8558-9122>),
  Marcio Dorn [aut],
  Mario Inostroza-Ponta [aut]
Maintainer: Jorge Parraga-Alava <jorge.parraga@utm.edu.ec>
Repository: CRAN
Date/Publication: 2026-05-14 14:10:10 UTC
Built: R 4.5.2; ; 2026-05-14 14:54:54 UTC; unix
