ImmunData               ImmunData: A Unified Structure for Immune
                        Receptor Repertoire Data
agg_receptors           Aggregates AIRR data into receptors
agg_repertoires         Aggregate AIRR data into repertoires
agg_strata              Aggregate repertoires into strata
annotate_anndata        Annotate an AnnData object from ImmunData (by
                        barcode)
annotate_immundata      Annotate ImmunData object
annotate_seurat         Annotate a Seurat object from ImmunData (by
                        barcode)
collect.ImmunData       Collect ImmunData annotations
compute.ImmunData       Compute ImmunData annotations
count.ImmunData         Count the number of chains in ImmunData
dimnames.ImmunData      Get Annotation Dimnames from ImmunData
dimnames<-.ImmunData    Prevent Renaming ImmunData via dimnames
downsample_immundata    Downsample ImmunData annotations at the
                        repertoire level
filter_immundata        Filter ImmunData by receptor features, barcodes
                        or any annotations
from_immunarch          Convert an immunarch Object into an ImmunData
                        Dataset
imd_schema              Get Immundata internal schema field names
make_default_preprocessing
                        Preprocessing and postprocessing of input
                        immune repertoire files
make_receptor_schema    Create or validate a receptor schema object
make_seq_options        Build a 'seq_options' list for sequence‑based
                        receptor filtering
mutate_immundata        Modify or Add Columns to ImmunData Annotations
names<-.ImmunData       Prevent Renaming ImmunData via names
read_immundata          Load a saved ImmunData from disk
read_metadata           Load and Validate Metadata Table for Immune
                        Repertoire Files
read_repertoires        Read and process immune repertoire files to
                        immundata
rename_strata           Rename strata labels
write_immundata         Save ImmunData to disk
