R: Analysis of Microbial Social Behavior in Bacterial Consortia

# Analysis of Microbial Social Behavior in Bacterial Consortia

## Documentation for package ‘bsocialv2’ version 0.2.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

analyze_biofilm_sequence | Analyze Biofilm Assembly Sequences
analyze_biofilm_sequence-method | Analyze Biofilm Assembly Sequences
analyze_diversity | Analyze Diversity Effect on Fitness
analyze_diversity-method | Analyze Diversity Effect on Fitness
analyze_growth | Analyze Growth Metrics
analyze_growth-method | Analyze Growth Metrics
analyze_social_behavior | Analyze Social Behavior (Fitness Effects)
analyze_social_behavior-method | Analyze Social Behavior (Fitness Effects)
analyze_stability | Analyze Consortium Stability
analyze_stability-method | Analyze Consortium Stability
bsocial-class | S4 Class for Microbial Social Behavior Analysis
calculate_growth_params | Calculate Growth Parameters from Preprocessed Curves
calculate_growth_params-method | Calculate Growth Parameters from Preprocessed Curves
plot_growth_scatter | Plot Growth Scatter (LogPhase vs NGen)
plot_growth_scatter-method | Plot Growth Scatter (LogPhase vs NGen)
plot_processed_curves | Plot Preprocessed Growth Curves
plot_processed_curves-method | Plot Preprocessed Growth Curves
summarize_social_behavior | Classify Strains as Cooperators, Cheaters, or Neutrals
summarize_social_behavior-method | Classify Strains as Cooperators, Cheaters, or Neutrals
transform_curated_data | Import Pre-processed (Curated) Data
transform_curated_data-method | Import Pre-processed (Curated) Data
transform_raw_data | Preprocess Raw Plate Reader Data
transform_raw_data-method | Preprocess Raw Plate Reader Data