Package: W4MRUtils
Title: Useful Functions for Harmonized W4M Tool Development
Version: 1.2.2
Authors@R: c(
    person("Lain", "Pavot", "", "lain.pavot@inrae.fr", role = c("aut")),
    person("Melanie", "Petera", "", "melanie.petera@inrae.fr", role = c("aut", "cre")),
    person("Helge", "Hecht", "", "helge.hecht@recetox.muni.cz", role = c("ctb")))
Description: Provides a set of utility function to prevent the spread of
    utility scripts in W4M (Workflow4Metabolomics) tools, and centralize
    them in a single package.
    To note, some are meant to be replaced by the use of dedicated packages in the future, like
    the parse_args() function: it is here only to prepare the ground for
    more global changes in W4M scripts and tools.
    This package is used by part of the W4M Galaxy modules, some of them  
    being available on the community-maintained GitHub repository for 
    Metabolomics' Galaxy tools <https://github.com/workflow4metabolomics/tools-metabolomics>. 
    See Delporte et al (2025) <doi:10.1002/cpz1.70095> for more details. 
License: AGPL (>= 3)
Encoding: UTF-8
RoxygenNote: 7.3.2
Imports: methods, rlang, stats, graphics, grDevices
Suggests: covr, DT, knitr, optparse, pkgdown, rmarkdown, testthat (>=
        3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
Collate: dataframe_helpers.R miniTools.R RcheckLibrary.R
        optparse_helper.R galaxy.R logging.R utils.R
        Filtering_datasets.R intensity_checks.R
NeedsCompilation: no
Packaged: 2026-04-22 21:34:28 UTC; melpetera
Author: Lain Pavot [aut],
  Melanie Petera [aut, cre],
  Helge Hecht [ctb]
Maintainer: Melanie Petera <melanie.petera@inrae.fr>
Repository: CRAN
Date/Publication: 2026-04-22 22:20:02 UTC
Built: R 4.5.2; ; 2026-04-23 00:01:54 UTC; unix
