# Generated by roxygen2: do not edit by hand

S3method(Nematode::Ecological.Indices,data.frame)
S3method(Nematode::Ecological.Indices,default)
S3method(Nematode::Ecological.Indices,matrix)
S3method(Nematode::NEF,data.frame)
S3method(Nematode::NEF,default)
S3method(Nematode::NEF,matrix)
S3method(Nematode::NMF,data.frame)
S3method(Nematode::NMF,default)
S3method(Nematode::NMF,matrix)
S3method(Nematode::cal.BI,data.frame)
S3method(Nematode::cal.BI,default)
S3method(Nematode::cal.BI,matrix)
S3method(Nematode::cal.CI,data.frame)
S3method(Nematode::cal.CI,default)
S3method(Nematode::cal.CI,matrix)
S3method(Nematode::cal.EI,data.frame)
S3method(Nematode::cal.EI,default)
S3method(Nematode::cal.EI,matrix)
S3method(Nematode::cal.H,data.frame)
S3method(Nematode::cal.H,default)
S3method(Nematode::cal.H,matrix)
S3method(Nematode::cal.J,data.frame)
S3method(Nematode::cal.J,default)
S3method(Nematode::cal.J,matrix)
S3method(Nematode::cal.MI,data.frame)
S3method(Nematode::cal.MI,default)
S3method(Nematode::cal.MI,matrix)
S3method(Nematode::cal.NCR,data.frame)
S3method(Nematode::cal.NCR,default)
S3method(Nematode::cal.NCR,matrix)
S3method(Nematode::cal.PPI,data.frame)
S3method(Nematode::cal.PPI,default)
S3method(Nematode::cal.PPI,matrix)
S3method(Nematode::cal.SI,data.frame)
S3method(Nematode::cal.SI,default)
S3method(Nematode::cal.SI,matrix)
S3method(Nematode::cal.SRI,data.frame)
S3method(Nematode::cal.SRI,default)
S3method(Nematode::cal.SRI,matrix)
S3method(Nematode::cal.Simpson,data.frame)
S3method(Nematode::cal.Simpson,default)
S3method(Nematode::cal.Simpson,matrix)
S3method(Nematode::cal.TD,data.frame)
S3method(Nematode::cal.TD,default)
S3method(Nematode::cal.TD,matrix)
S3method(Nematode::cal.WI,data.frame)
S3method(Nematode::cal.WI,default)
S3method(Nematode::cal.WI,matrix)
S3method(Nematode::check_nematode_genus,character)
S3method(Nematode::check_nematode_genus,data.frame)
S3method(Nematode::check_nematode_genus,default)
S3method(Nematode::cp_rel_abundance,data.frame)
S3method(Nematode::cp_rel_abundance,default)
S3method(Nematode::cp_rel_abundance,matrix)
S3method(Nematode::diet_rel_abundance,data.frame)
S3method(Nematode::diet_rel_abundance,default)
S3method(Nematode::diet_rel_abundance,matrix)
S3method(Nematode::num_species,data.frame)
S3method(Nematode::num_species,default)
S3method(Nematode::num_species,matrix)
S3method(Nematode::rel_abundance,data.frame)
S3method(Nematode::rel_abundance,default)
S3method(Nematode::rel_abundance,matrix)
S3method(Nematode::runNMDS,data.frame)
S3method(Nematode::runNMDS,default)
S3method(Nematode::runNMDS,matrix)
S3method(Nematode::runPCoA,data.frame)
S3method(Nematode::runPCoA,default)
S3method(Nematode::runPCoA,matrix)
S3method(Nematode::runSimper,Ordination)
S3method(Nematode::runSimper,default)
S3method(summary,NMDS)
S3method(summary,PCoA)
export(Ecological.Indices)
export(NEF)
export(NMF)
export(cal.BI)
export(cal.CI)
export(cal.EI)
export(cal.H)
export(cal.J)
export(cal.MI)
export(cal.NCR)
export(cal.PPI)
export(cal.SI)
export(cal.SRI)
export(cal.Simpson)
export(cal.TD)
export(cal.WI)
export(check_nematode_genus)
export(cp_rel_abundance)
export(diet_rel_abundance)
export(fuzzy_genus_match)
export(num_species)
export(rel_abundance)
export(runNMDS)
export(runPCoA)
export(runSimper)
importFrom(dplyr,"%>%")
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,any_of)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,select)
importFrom(purrr,reduce)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(utils,adist)
importFrom(utils,combn)
importFrom(utils,data)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,packageVersion)
importFrom(vegan,adonis2)
importFrom(vegan,anosim)
importFrom(vegan,decostand)
importFrom(vegan,metaMDS)
importFrom(vegan,simper)
importFrom(vegan,stressplot)
