Ecological.Indices      Calculate Ecological Indices of Nematodes
NEF                     Nematode Energy Footprints (NEF) Calculation
NMF                     Nematode Metabolic Footprints (NMF) Calculation
cal.BI                  Calculate Basic Index (BI)
cal.CI                  Calculate Channel Index (CI)
cal.EI                  Calculate Enrichment Index (EI)
cal.H                   Calculate Shannon-Wiener Index (H)
cal.J                   Calculate Pielou's Evenness Index (J)
cal.MI                  Calculate Maturity Index (MI)
cal.NCR                 Calculate Nematode Channel Ratio (NCR)
cal.PPI                 Calculate Plant Parasite Index (PPI)
cal.SI                  Calculate Structure Index (SI)
cal.SRI                 Calculate Species Richness Index (SRI)
cal.Simpson             Calculate Simpson Index
cal.TD                  Calculate Trophic Diversity (TD) Index
cal.WI                  Calculate Wasilewska Index (WI)
check_nematode_genus    Check validity of nematode genus names against
                        reference database
cp_rel_abundance        Calculate CP Relative or Absolute Abundance
diet_rel_abundance      Calculate Diet Relative or Absolute Abundance
fuzzy_genus_match       Fuzzy Matching of Nematode Genus Names
nematode.ave.mass       Nematode Genus and Family Average Body Mass
nematode.info           Nematode Taxonomic and Functional Traits
num_species             Calculate Number of Species
rel_abundance           Calculate the Relative Abundance of Nematodes
runNMDS                 Non-Metric Multidimensional Scaling (NMDS)
                        Analysis
runPCoA                 Principal Coordinates Analysis (PCoA) Analysis
runSimper               Similarity Percentages Analysis
summary.NMDS            Summarize NMDS Results
