R: Family Age-at-Onset Data Simulation and Penetrance Estimation

# Family Age-at-Onset Data Simulation and Penetrance Estimation

## Documentation for package ‘FamEvent’ version 3.3

- DESCRIPTION file.

## Help Pages

FamEvent-package | Family age-at-onset data simulation and penetrance estimation
carrierprob | Compute mutation carrier probabilities for individuals with missing gentoypes
fampower | Simulation-based power calculation for genetic effect
LSfam | Ontario Lynch Syndrom families
penetrance | Penetrance function and confidence intervals
penetrance_cmp | Penetrance function for competing risk models and confidence intervals
penmodel | Fit a penetrance model
penmodelEM | EM algorithm for estimating the penetrance model with missing genotypes
penmodel_cmp | Fit a penetrance model for competing risks data
penplot | Plot penetrance functions
penplot_cmp | Plot penetrance functions from competing risk models
plot.penmodel | Plot method for 'penmodel'
plot.penmodel_cmp | Plot method for 'penmodel_cmp'
plot.simfam | Plot method for 'simfam' or Plot pedigrees
plot.simfam2 | Plot method for 'simfam2' or Plot pedigrees
plot.simfam_cmp | Plot method for 'simfam_cmp' or Plot pedigrees
plot.simfam_tvc | Plot method for 'simfam_tvc' or Plot pedigrees
print.penmodel | Print method for 'penmodel'.
print.penmodel_cmp | Print method for 'penmodel_cmp'.
print.summary.penmodel | Print method for 'summary.penmodel' of a fitted penetrance model.
print.summary.penmodel_cmp | Print method for 'summary.penmodel_cmp' of a fitted competing risks penetrance model.
simfam | Generate familial time-to-event data
simfam2 | Generate familial time-to-event data with Kinship or IBD matrices.
simfam_cmp | Generate familial competing risks data
simfam_tvc | Generate familial time-to-event data with a time-varying covariate
summary.penmodel | Summary method for class 'penmodel'
summary.penmodel_cmp | Summary method for class 'penmodel_cmp'
summary.simfam | Summary method for 'simfam'
summary.simfam2 | Summary method for 'simfam2'
summary.simfam_cmp | Summary method for 'simfam_cmp'
summary.simfam_tvc | Summary method for 'simfam_tvc'