R: Topological Correlation Coefficient

# Topological Correlation Coefficient

## Documentation for package ‘topcc’ version 1.2

- DESCRIPTION file.

## Help Pages

autotopcor | Auto Topological Correlation Coefficient (ATCC)
autotopcortest | Significance Test for Auto Topological Correlation Coefficient
indextest | indextest
local_shuffle | Generate local random permutation surrogates for a time series
paralleltopcortest | Significance test for TCC using shuffling (parallel version, with optional seed)
sliding_window_tcc_test | Sliding window TCC significance test using local random permutation surrogates
tcc_local_shuffle | Calculate TCC after local random permutation of two time series within a window
tcc_local_shuffle_dist_parallel | Generate distribution of TCC values by repeatedly applying local shuffling (parallel)
tdoshuffling | Generate surrogates by shuffling (random permutation) of rows and columns.
topcor | Calculate Topological correlation Coefficient (TCC) between two TDOs
topcortest | Significance test for TCC using shuffling (serial version)