Package: ecodive
Type: Package
Title: Parallel and Memory-Efficient Ecological Diversity Metrics
Version: 2.2.6
Authors@R: c(
    person(
      "Daniel P.", "Smith",
      email   = "dansmith01@gmail.com",
      role    = c("aut", "cre"),
      comment = c(ORCID = "0000-0002-2479-2044")),
    person(
      "Melissa", "O'Neill",
      role    = c("ctb", "cph"),
      comment = "Author of PCG random number generator"),
    person(
      "Alkek Center for Metagenomics and Microbiome Research", 
      role = c("cph", "fnd") ))
Description: 
    Computes alpha and beta diversity metrics using concurrent 'C' threads.
    Metrics include 'UniFrac', Faith's phylogenetic diversity, Bray-Curtis
    dissimilarity, Shannon diversity index, and many others.
    Also parses newick trees into 'phylo' objects and rarefies feature tables.
URL: https://cmmr.github.io/ecodive/, https://github.com/cmmr/ecodive
BugReports: https://github.com/cmmr/ecodive/issues
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6.0)
RoxygenNote: 7.3.3
Config/Needs/website: rmarkdown
Config/testthat/edition: 3
Imports: parallel, utils
Suggests: knitr, Matrix, parallelly, rmarkdown, slam, testthat (>=
        3.0.0)
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2026-04-14 16:52:58 UTC; Daniel
Author: Daniel P. Smith [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-2479-2044>),
  Melissa O'Neill [ctb, cph] (Author of PCG random number generator),
  Alkek Center for Metagenomics and Microbiome Research [cph, fnd]
Maintainer: Daniel P. Smith <dansmith01@gmail.com>
Repository: CRAN
Date/Publication: 2026-04-14 17:30:22 UTC
Built: R 4.5.2; aarch64-apple-darwin20; 2026-04-15 04:54:57 UTC; unix
Archs: ecodive.so.dSYM
