LeakSplits-class        S4 Classes for bioLeak Pipeline
as_leaksplits           Convert a splitGraph split_spec into bioLeak
                        splits
as_rsample              Convert LeakSplits to an rsample resample set
audit_batch_assoc       Batch / study association results from a
                        LeakAudit
audit_duplicates        Near-duplicate pairs from a LeakAudit
audit_info              Auxiliary information from a LeakAudit
audit_leakage           Audit leakage and confounding
audit_leakage_by_learner
                        Audit leakage per learner
audit_perm_gap          Permutation-gap test results from a LeakAudit
audit_report            Render an HTML audit report
audit_target_assoc      Target-leakage scan results from a LeakAudit
benchmark_leakage_suite
                        Simulation benchmark matrix for leakage
                        diagnostics
calibration_summary     Calibration diagnostics for binomial
                        predictions
check_split_overlap     Check split overlap invariants
confounder_sensitivity
                        Confounder sensitivity summaries
cv_ci                   Confidence intervals for cross-validated
                        metrics
delta_lsi               Delta Leakage Sensitivity Index (Delta LSI)
dlsi_R_eff              Effective number of paired repeats from a
                        LeakDeltaLSI
dlsi_ci                 BCa confidence interval from a LeakDeltaLSI
dlsi_metric             Raw delta-metric estimate from a LeakDeltaLSI
dlsi_p_value            Sign-flip p-value from a LeakDeltaLSI
dlsi_repeats            Per-repeat metric data frames from a
                        LeakDeltaLSI
dlsi_robust             Huber-robust delta_lsi point estimate from a
                        LeakDeltaLSI
dlsi_tier               Inference tier from a LeakDeltaLSI
fit_metrics             Per-fold metric data frame from a LeakFit
fit_resample            Fit and evaluate with leakage guards over
                        predefined splits
guard_ensure_levels     Ensure consistent categorical levels for
                        guarded preprocessing
guard_fit               Fit leakage-safe preprocessing pipeline
guard_to_recipe         Convert guard preprocessing steps to a recipes
                        recipe
impute_guarded          Leakage-safe data imputation via guarded
                        preprocessing
make_split_plan         Create leakage-resistant splits
plot,LeakAudit,missing-method
                        Plot method for LeakAudit
plot,LeakDeltaLSI,missing-method
                        Plot method for LeakDeltaLSI
plot,LeakFit,missing-method
                        Plot method for LeakFit
plot_calibration        Plot calibration curve for binomial predictions
plot_confounder_sensitivity
                        Plot confounder sensitivity
plot_dlsi_repeats       Plot per-repeat Delta_r values from a
                        LeakDeltaLSI object
plot_fold_balance       Plot fold balance of class counts per fold
plot_overlap_checks     Plot overlap diagnostics between train/test
                        groups
plot_perm_distribution
                        Plot permutation distribution for a LeakAudit
                        object
plot_time_acf           Plot ACF of test predictions for time-series
                        leakage checks
predict.GuardFit        Apply a fitted GuardFit transformer to new data
print.LeakTune          Print a LeakTune object
show,LeakAudit-method   Display summary for LeakAudit objects
show,LeakFit-method     Display summary for LeakFit objects
show,LeakSplits-method
                        Display summary for LeakSplits objects
simulate_leakage_suite
                        Simulate leakage scenarios and audit results
summary.LeakAudit       Summarize a leakage audit
summary.LeakDeltaLSI    Summarize a LeakDeltaLSI object
summary.LeakFit         Summarize a LeakFit object
summary.LeakTune        Summarize a nested tuning result
tune_resample           Leakage-aware nested tuning with tidymodels
