EcoEnsemble-package     A general framework for combining ecosystem
                        models
EnsembleData            Constructor for the 'EnsembleData' class
EnsembleData-class      A class to hold the Ensemble data
EnsembleFit             The constructor for the 'EnsembleFit' object
EnsembleFit-class       A class to hold the samples or point estimates
                        from the ensemble model.
EnsemblePrior-class     A class to hold the priors for the ensemble
                        model.
EnsembleSample          A constructor for the 'EnsembleSample' object
EnsembleSample-class    A class to hold samples of the ensemble model
IndLTPrior              Constructor for the 'EnsemblePrior' class
IndLTPrior-class        A class to hold the priors for the ensemble
                        model.
IndSTPrior-class        A class to hold the priors for the ensemble
                        model.
KalmanFilter_back       Backwards Kalman filter
SSB_ewe                 Ecopath with EcoSim SSB
SSB_fs                  FishSUMS SSB
SSB_lm                  LeMans SSB
SSB_miz                 mizer SSB
SSB_obs                 Stock assessment SSB
ShaSTPrior-class        A class to hold the priors for the ensemble
                        model.
Sigma_ewe               Ecopath with EcoSim Sigma
Sigma_fs                FishSUMS Sigma
Sigma_lm                LeMans Sigma
Sigma_miz               mizer Sigma
Sigma_obs               Stock assessment Sigma
TruthPrior-class        A class to hold the priors for the truth model
                        in the ensemble framework
fit_ensemble_model      Fits the ensemble model
generate_sample         Generate samples from a fitted ensemble model.
generate_sample_array   Generate samples from a fitted ensemble model
                        to get MCMC effective sample size diagnostics
get_mcmc_ensemble_model
                        Return the compiled ensemble model Stan object.
plot.EnsembleSample     Plot the ensemble output
prior_ensemble_model    Generate samples of parameters from prior
                        distribution
sample_prior            Generate samples of latent variables from prior
                        predictive distribution
