S3method(as.list,coef.egf)
S3method(coef,egf)
S3method(coef,egf_no_fit)
S3method(coef,simulate.egf_model)
S3method(confint,egf)
S3method(confint,fitted.egf)
S3method(confint,predict.egf)
S3method(confint,profile.egf)
S3method(df.residual,egf)
S3method(df.residual,egf_no_fit)
S3method(egf,egf_model)
S3method(egf,simulate.egf_model)
S3method(egf_top,default)
S3method(egf_top,egf)
S3method(egf_top,egf_model)
S3method(egf_top,egf_no_fit)
S3method(extractAIC,egf)
S3method(fitted,egf)
S3method(fitted,egf_no_fit)
S3method(fixef,egf)
S3method(fixef,egf_no_fit)
S3method(formula,egf)
S3method(formula,egf_no_fit)
S3method(getCall,egf)
S3method(getCall,egf_no_fit)
S3method(getCall,simulate.egf_model)
S3method(labels,coef.egf)
S3method(logLik,egf)
S3method(model.frame,egf)
S3method(model.frame,egf_no_fit)
S3method(model.matrix,egf)
S3method(model.matrix,egf_no_fit)
S3method(nobs,egf)
S3method(nobs,egf_no_fit)
S3method(plot,confint.egf)
S3method(plot,egf)
S3method(plot,profile.egf)
S3method(predict,egf)
S3method(print,coef.egf)
S3method(print,egf)
S3method(print,egf_no_fit)
S3method(print,summary.egf)
S3method(profile,egf)
S3method(ranef,egf)
S3method(ranef,egf_no_fit)
S3method(simulate,egf)
S3method(simulate,egf_model)
S3method(summary,egf)
S3method(terms,egf)
S3method(terms,egf_no_fit)
S3method(vcov,egf)
export(InverseWishart)
export(LKJ)
export(Normal)
export(R0)
export(Wishart)
export(cov2theta)
export(dgi)
export(egf)
export(egf_control)
export(egf_control_plot)
export(egf_has_converged)
export(egf_has_random)
export(egf_model)
export(egf_optimizer)
export(egf_parallel)
export(egf_top)
export(finalsize)
export(fixef)
export(pgi)
export(qgi)
export(ranef)
export(rgi)
export(theta2cov)
export(timescale)
importFrom(Matrix,sparse.model.matrix)
importFrom(TMB,MakeADFun)
importFrom(TMB,newton)
importFrom(TMB,openmp)
importFrom(TMB,sdreport)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colorRamp)
importFrom(grDevices,dev.flush)
importFrom(grDevices,dev.hold)
importFrom(grDevices,rgb)
importFrom(graphics,abline)
importFrom(graphics,axTicks)
importFrom(graphics,axis)
importFrom(graphics,box)
importFrom(graphics,grconvertX)
importFrom(graphics,grconvertY)
importFrom(graphics,lines)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,plot.new)
importFrom(graphics,plot.window)
importFrom(graphics,points)
importFrom(graphics,polygon)
importFrom(graphics,rect)
importFrom(graphics,segments)
importFrom(graphics,strheight)
importFrom(graphics,strwidth)
importFrom(graphics,text)
importFrom(graphics,title)
importFrom(methods,as)
importFrom(methods,is)
importFrom(methods,new)
importFrom(nlme,fixef)
importFrom(nlme,ranef)
importFrom(parallel,clusterEvalQ)
importFrom(parallel,clusterExport)
importFrom(parallel,clusterMap)
importFrom(parallel,clusterSetRNGStream)
importFrom(parallel,makePSOCKcluster)
importFrom(parallel,mcMap)
importFrom(parallel,mcmapply)
importFrom(parallel,stopCluster)
importFrom(stats,aggregate)
importFrom(stats,approx)
importFrom(stats,as.formula)
importFrom(stats,coef)
importFrom(stats,complete.cases)
importFrom(stats,confint)
importFrom(stats,cov2cor)
importFrom(stats,df.residual)
importFrom(stats,extractAIC)
importFrom(stats,fitted)
importFrom(stats,formula)
importFrom(stats,getCall)
importFrom(stats,lm)
importFrom(stats,logLik)
importFrom(stats,model.frame)
importFrom(stats,model.matrix)
importFrom(stats,model.offset)
importFrom(stats,na.fail)
importFrom(stats,na.omit)
importFrom(stats,na.pass)
importFrom(stats,nlm)
importFrom(stats,nlminb)
importFrom(stats,nobs)
importFrom(stats,optim)
importFrom(stats,optimHess)
importFrom(stats,plogis)
importFrom(stats,predict)
importFrom(stats,profile)
importFrom(stats,qchisq)
importFrom(stats,qlogis)
importFrom(stats,qnorm)
importFrom(stats,runif)
importFrom(stats,simulate)
importFrom(stats,spline)
importFrom(stats,terms)
importFrom(stats,update)
importFrom(stats,vcov)
importFrom(utils,capture.output)
importFrom(utils,str)
importMethodsFrom(Matrix,colSums)
importMethodsFrom(Matrix,diag)
importMethodsFrom(Matrix,rowSums)
importMethodsFrom(Matrix,t)
importMethodsFrom(Matrix,tcrossprod)
