R: Bayesian Inference from Count Data using Discrete Uniform Priors

# Bayesian Inference from Count Data using Discrete Uniform Priors

## Documentation for package ‘dupiR’ version 1.2.1

- DESCRIPTION file.
- Package NEWS.

## Help Pages

dupiR-package | Bayesian inference from count data using discrete uniform priors
compute_ecdf | Compute ECDF (empirical cumulative distribution function)
compute_normalization_constant | Compute normalization constant
compute_posterior | Compute the posterior probability distribution of the population size for an object of class 'Counts'
compute_posterior-method | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
compute_posterior_with_replacement | Compute posterior probability with replacement
compute_sum | Compute sum of terms (function F, Comoglio et al.)
compute_term | Compute single term (function F, Comoglio et al.)
Counts-class | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
dupiR | Bayesian inference from count data using discrete uniform priors
gamma_poisson_clough | Compute posterior probability using a Gamma-Poisson model (Clough et al.)
get_counts | Get 'counts' slot for an object of class 'Counts'
get_counts-method | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
get_fractions | Get 'fractions' slot for an object of class 'Counts'
get_fractions-method | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
get_posterior_param | Compute posterior probability distribution parameters (e.g. credible intervals) for an object of class 'Counts'
get_posterior_param-method | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
initialize-method | Initialize 'Counts' class
new_counts | Constructor for 'Counts' class
plot-method | Plot method for 'Counts' class
plot_posterior | Plot posterior probability distribution and display posterior parameters for an object of class 'Counts'
plot_posterior-method | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
set_counts<- | Set 'counts' slot for an object of class 'Counts'
set_counts<--method | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
set_fractions<- | Set 'fractions' slot for an object of class 'Counts'
set_fractions<--method | An S4 class to store measurements (count data, sampling fractions), prior support and posterior parameters
show-method | Print method for 'Counts' class
summary-method | Summary method for 'Counts' class