R: Tools for Analysis of Diversity and Similarity in Biological Systems

# Tools for Analysis of Diversity and Similarity in Biological Systems

## Documentation for package ‘divo’ version 1.0.2

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

cvg | cvg Coverage
divo | Tools for Analysis of Diversity and Similarity in Biological Systems
dp | dp Diversity Profile
dp.ht | dp.ht Diversity Profile with the Horvitz-Thompson Adjustment
ens | ens Effective Number of Species
ens.ht | ens.ht Effective Number of Species with the Horvitz-Thompson Correction
i.in | i.in Information Index (I index) for 2-Way Table
i.inp | i.inp Information Index (I index) for 2-Way, 2 Column Table
ji | ji Jaccard Index
li | li Sorensen Index
mh | mh Morisita-Horn Index
pg | pg Power-Geometric Index
pg.ht | pg.ht Power-Geometric Index with the Horvitz-Thompson Correction
rd | rd Renyi's Divergence
srd | srd Symmetrized Renyi's Divergence
TCR.Data | TCR.Data: Repertoires of Naive and Regulatory T-cell Populations
x | Example dataset for divo package