ROY_BIG_BL              "ROY_BIG_BL" color palette
S3_Math                 '"xifti"' S3 Math methods
S3_Ops                  '"xifti"' S3 Ops methods
S3_Summary              '"xifti"' S3 Summary methods
add_surf                Add HCP surface(s) to a '"xifti"'
apply_parc              Apply function over locations in each parcel
apply_xifti             Apply a function along the rows or columns of a
                        '"xifti"'
as.matrix.xifti         Convert a '"xifti"' to a matrix
as.xifti                Assemble a '"xifti"' from data
boundary_mask_surf      Boundary region of a mask
ciftiTools              ciftiTools: Tools for Reading and Visualizing
                        CIFTI Brain Files
ciftiTools.files        'ciftiTools' files
ciftiTools.getOption    Get a 'ciftiTools' option
ciftiTools.listOptions
                        List 'ciftiTools' options
ciftiTools.setOption    Set a 'ciftiTools' option
combine_xifti           Combine '"xifti"'s with non-overlapping brain
                        structures
convert_xifti           Convert '"xifti"'
dim.xifti               Dimensions of a '"xifti"'
edit_mask_surf          Edit mask on surface
even_vert_samp          Evenly sample vertices of mesh
expand_color_pal        Interpolates between entries in the input
                        palette to make a larger palette with COLOR_RES
                        entries.
faces_Param             faces
fix_xifti               Fix a '"xifti"'
get_wb_cmd_path         Get the Connectome Workbench command path
impute_xifti            Impute '"xifti"' data
infer_resolution        Infer resolution from '"xifti"' and surfaces
info_cifti              Get CIFTI metadata
is.cifti                Validate a '"xifti"' object
is.surf                 Validate a '"surf"' object (vertices + faces)
is.xifti                Validate a '"xifti"' object.
load_parc               Load a parcellation included in 'ciftiTools'
load_surf               Load a '"surf"' included in 'ciftiTools'
make_color_pal          Make a color palette.
mask_Param_vertices     mask: vertices
mask_surf               Mask surface
merge_xifti             Concatenate '"xifti"'s
move_from_mwall         Move data locations from medial wall
move_from_submask       Move data locations from subcortex mask
move_to_mwall           Move data locations to the medial wall
move_to_submask         Move data locations to the subcortex mask
newdata_xifti           Replace the data in a '"xifti"'
parc_add_subcortex      Add subcortex to cortical parcellation
parc_borders            Parcellation borders
parc_vals_to_xifti      Convert parcellation values to '"xifti"'
plot.surf               S3 method: plot surface
plot.xifti              S3 method: use 'view_xifti' to plot a '"xifti"'
                        object
read_cifti              Read a CIFTI file
read_surf               Get a '"surf"' object
read_xifti2             Read in GIFTI files as a '"xifti"' object
remap_cifti             Remap CIFTI data
remap_gifti             Remap GIFTI metric or label data
remove_xifti            Remove a component from a '"xifti"'
resample_cifti          Resample CIFTI data
resample_cifti_from_template
                        Resample a CIFTI from a template
resample_gifti          Resample a GIFTI file (with its ROI)
resample_surf           Resample a '"surf"' object
rotate_surf             Rotate a '"surf"' object
run_wb_cmd              Wrapper for Connectome Workbench Commands
scale_xifti             Scale CIFTI
select_xifti            Select columns of a '"xifti"'
separate_cifti          Separate a CIFTI file
set_names_xifti         Set '"xifti"' column names
smooth_cifti            Smooth CIFTI data
smooth_gifti            Smooth a metric GIFTI file
substructure_table      Substructure table
summary.surf            Summarize a '"surf"' object
summary.xifti           Summarize a '"xifti"' object
supported_intents       The NIFTI intents supported by 'ciftiTools'
surf_area               Surface area calculation
transform_xifti         Apply a univariate transformation to a
                        '"xifti"' or pair of '"xifti"'s.
unmask_subcortex        Undo the volumetric mask to the subcortex
use_color_pal           Use a color palette
vertices_Param          vertices
view_comp               View composite of images
view_surf               View '"surf"' object(s)
view_xifti              View a '"xifti"' object
view_xifti_surface      View cortical surface data in a '"xifti"'
view_xifti_volume       View subcortical data in a '"xifti"'
write_cifti             Write a CIFTI file from a '"xifti"' object
write_metric_gifti      Write a data matrix to a GIFTI metric file
write_subcort_nifti     Write subcortical data to NIFTI files
write_surf_gifti        Write a '"surf"' to a GIFTI surface file
write_xifti2            Write a '"xifti"' object to GIFTI and NIFTI
                        files
