Package: DiffXTables
Title: Pattern Analysis Across Contingency Tables
Version: 0.1.3
Date: 2021-05-15
Authors@R: 
    c(person(given = "Ruby",
             family = "Sharma",
             role = "aut",
             email = "ruby49@nmsu.edu",
             comment = c(ORCID = "0000-0001-7774-4065")
             ),
      person(given = "Joe",
             family = "Song",
             role = c("aut", "cre"),
             email = "joemsong@cs.nmsu.edu",
             comment = c(ORCID = "0000-0002-6883-6547")
             )
      )
Author: Ruby Sharma [aut] (<https://orcid.org/0000-0001-7774-4065>),
  Joe Song [aut, cre] (<https://orcid.org/0000-0002-6883-6547>)
Maintainer: Joe Song <joemsong@cs.nmsu.edu>
Description: Statistical hypothesis testing of pattern heterogeneity
    via differences in underlying distributions across multiple
    contingency tables. Five tests are included: the comparative
    chi-squared test (Song et al. 2014) <doi:10.1093/nar/gku086>
    (Zhang et al. 2015) <doi:10.1093/nar/gkv358>, the Sharma-Song
    test (Sharma et al. 2021) <doi:10.1093/bioinformatics/btab240>, 
    the heterogeneity test, the marginal-change test (Sharma et al.
    2020) <doi:10.1145/3388440.3412485>, and the strength test
    (Sharma et al. 2020) <doi:10.1145/3388440.3412485>. Under the
    null hypothesis that row and column variables are statistically
    independent and joint distributions are equal, their test
    statistics all follow an asymptotically chi-squared distribution.
    A comprehensive type analysis categorizes the relation among the
    contingency tables into type null, 0, 1, and 2 (Sharma et al.
    2020) <doi:10.1145/3388440.3412485>. They can identify
    heterogeneous patterns that differ in either the first order
    (marginal) or the second order (differential departure from
    independence). Second-order differences reveal more
    fundamental changes than first-order differences across
    heterogeneous patterns.
Depends: R (>= 3.0), pander
Imports: Rdpack (>= 0.6-1)
RdMacros: Rdpack
Suggests: Ckmeans.1d.dp, FunChisq, knitr, rmarkdown, testthat
License: LGPL (>= 3)
Encoding: UTF-8
NeedsCompilation: no
VignetteBuilder: knitr
RoxygenNote: 7.1.1
Packaged: 2021-05-15 23:20:20 UTC; joesong
Repository: CRAN
Date/Publication: 2021-05-16 04:30:02 UTC
Built: R 4.3.3; ; 2025-01-24 15:29:53 UTC; unix
