R: Toolkit to Identify Candidate Synthetic Lethality

# Toolkit to Identify Candidate Synthetic Lethality

## Documentation for package ‘BiSEp’ version 2.3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

BiSEp-package | BiSEp: Bimodality in gene expression to dissect tumours and reveal synthetic lethal drug targets and biomarkers
BEEM | BEEM: Bimodal Expression Exclusive with Mutation
BIGEE | BIGEE: Bimodal Gene Expression Exclusivity.
BISEP | BISEP: Bimodality in Gene Expression data.
BiSEp | BiSEp: Bimodality in gene expression to dissect tumours and reveal synthetic lethal drug targets and biomarkers
BISEP_dat | A list object containing 3 data frames.
BISEP_data | A list object containing 3 data frames.
expressionPlot | expressionPlot: Create visualisations from BIGEE output
FURE | FURE: Functional redundancy between synthetic lethal gene pairs
FURE_data | Output matrix from the BIGEE tool
INPUT_data | A Log2 Gene Expression matrix
MUT_data | A matrix containing discreet mutation calls
waterfallPlot | waterfallPlot: Create visualisations from BEEM output