Package: BICORN
Title: Integrative Inference of De Novo Cis-Regulatory Modules
Version: 0.1.0
Authors@R: c(person("Xi", "Chen", email = "xichen86@vt.edu", role = c("aut", "cre")),
             person("Jianhua", "Xuan", email = "xuan@vt.edu", role = "aut"))
Description: Prior transcription factor binding knowledge and target gene expression data are integrated in a Bayesian framework for functional cis-regulatory module inference. Using Gibbs sampling, we iteratively estimate transcription factor associations for each gene, regulation strength for each binding event and the hidden activity for each transcription factor.  
Depends: R (>= 3.4)
License: GPL-2
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1
Suggests: knitr, rmarkdown
Imports: stats
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2018-06-04 19:37:06 UTC; xichen
Author: Xi Chen [aut, cre],
  Jianhua Xuan [aut]
Maintainer: Xi Chen <xichen86@vt.edu>
Repository: CRAN
Date/Publication: 2018-06-06 10:30:06 UTC
Built: R 4.3.3; ; 2025-01-24 04:41:35 UTC; unix
