R: Relationship Matrices for Diploid and Autopolyploid Species

# Relationship Matrices for Diploid and Autopolyploid Species

## Documentation for package ‘AGHmatrix’ version 2.1.4

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

Amatrix | Construction of Relationship Matrix A
AmatrixPolyCross | Construction of pedigree-based relationship matrix with parental guessing possibility
datatreat | Organizes pedigree data in a chronological way
expandAmatrix | Add new crosses to a current A matrix
filterpedigree | Filter the pedigree to keep only the genealogy of a subset of individuals
formatmatrix | Transform a matrix in 3 columns
Gmatrix | Construction of Relationship Matrix G
Hmatrix | Construction of Combined Relationship Matrix H
Mcheck | Check and filter markers
missingdata | Survying on missing data
ped.mrode | Pedigree Data
ped.sol | Pedigree data for autopolyploid examples
snp.pine | Molecular data for diploid examples
snp.sol | Molecular data for autopolyploid examples