a2a	a2a
a2a.list	a2a
a2a.numeric	a2a
agg_index	agg_index
aphids	aphids
arthropods	arthropods
as.data.frame.intensity	as.data.frame.intensity
BetaBinomial	BetaBinomial
calpha.test	calpha.test
calpha.test.fisher	calpha.test
chisq.test	chisq.test
chisq.test.default	chisq.test
chisq.test.fisher	chisq.test
citrus_ctv	citrus_ctv
cloglog	link
clump	clump
clump.intensity	clump
codling_moths	codling_moths
coef.smle	coef.smle
count	intensity
count_data	intensity
dbetabinom	BetaBinomial
dogwood_anthracnose	dogwood_anthracnose
epiphy	epiphy
fit_two_distr	fit_two_distr
fit_two_distr.count	fit_two_distr
fit_two_distr.default	fit_two_distr
fit_two_distr.incidence	fit_two_distr
hop_viruses	hop_viruses
incidence	intensity
incidence_data	intensity
ind2sub	indAndSub
indAndSub	indAndSub
intensity	intensity
is.count	is.intensity
is.incidence	is.intensity
is.intensity	is.intensity
is.severity	is.intensity
link	link
logit	link
logLik.smle	logLik.smle
mapcomp	mapcomp
mapcomp.count	mapcomp
mapcomp.data.frame	mapcomp
mapcomp.incidence	mapcomp
mapcomp.matrix	mapcomp
mapped_var	mapped_var
mapped_var<-	mapped_var
mapping	mapping
mapping_	mapping
offspring_survival	offspring_survival
onion_bacterial_blight	onion_bacterial_blight
pbetabinom	BetaBinomial
power_law	power_law
probit	link
pyrethrum_ray_blight	pyrethrum_ray_blight
qbetabinom	BetaBinomial
rbetabinom	BetaBinomial
remap	mapping
sadie	sadie
sadie.count	sadie
sadie.data.frame	sadie
sadie.incidence	sadie
sadie.matrix	sadie
severity	intensity
severity_data	intensity
simulated_epidemics	simulated_epidemics
smle	smle
smle.default	smle
smle.intensity	smle
smle_betabinom	smle_wrappers
smle_binom	smle_wrappers
smle_nbinom	smle_wrappers
smle_pois	smle_wrappers
smle_wrappers	smle_wrappers
spatial_hier	spatial_hier
split.intensity	split.intensity
sub2ind	indAndSub
threshold	threshold
tobacco_viruses	tobacco_viruses
tomato_tswv	tomato_tswv
vcov.smle	vcov.smle
z.test	z.test
z.test.default	z.test
z.test.fisher	z.test
