R: Dynamic Trees for Learning and Design

# Dynamic Trees for Learning and Design

## Documentation for package ‘dynaTree’ version 1.2-16

- DESCRIPTION file.
- Code demos. Use demo() to run them.

## Help Pages

dynaTree-package | Dynamic trees for learning and design
alc | Class "dynaTree"
alc-method | Class "dynaTree"
alc-methods | Class "dynaTree"
alc.dynaTree | Calculate the ALC or predictive entropy statistic at the X locations, or ALC at new XX predictive locations
alcX | Class "dynaTree"
alcX-method | Class "dynaTree"
alcX-methods | Class "dynaTree"
alcX.dynaTree | Calculate the ALC or predictive entropy statistic at the X locations, or ALC at new XX predictive locations
classprobs | Class "dynaTree"
classprobs-method | Class "dynaTree"
classprobs-methods | Class "dynaTree"
coef.dynaTree | Prediction for Dynamic Tree Models
copy | Class "dynaTree"
copy-method | Class "dynaTree"
copy-methods | Class "dynaTree"
dynaTree | Fitting Dynamic Tree Models
dynaTree-class | Class "dynaTree"
dynaTrees | Fitting Dynamic Tree Models
elec2 | The ELEC2 Data Set
entropyX | Class "dynaTree"
entropyX-method | Class "dynaTree"
entropyX-methods | Class "dynaTree"
entropyX.dynaTree | Calculate the ALC or predictive entropy statistic at the X locations, or ALC at new XX predictive locations
getBF | Extract a Path of (log) Bayes Factors
ieci | Class "dynaTree"
ieci-method | Class "dynaTree"
ieci-methods | Class "dynaTree"
intervals | Class "dynaTree"
intervals-method | Class "dynaTree"
intervals-methods | Class "dynaTree"
plot.dynaTree | Plotting Predictive Distributions of Dynamic Tree models
predict.dynaTree | Prediction for Dynamic Tree Models
qEI-method | Class "dynaTree"
qEntropy-method | Class "dynaTree"
rejuvenate | Class "dynaTree"
rejuvenate-method | Class "dynaTree"
rejuvenate-methods | Class "dynaTree"
rejuvenate.dynaTree | Rejuvenate particles from the dynaTree posterior
relevance | Class "dynaTree"
relevance-method | Class "dynaTree"
relevance-methods | Class "dynaTree"
relevance.dynaTree | Calculate relevance statistics for input coordinates
retire | Class "dynaTree"
retire-method | Class "dynaTree"
retire-methods | Class "dynaTree"
retire.dynaTree | Retire (i.e. remove) data from the a dynaTree model
sameleaf | Class "dynaTree"
sameleaf-method | Class "dynaTree"
sameleaf-methods | Class "dynaTree"
sens | Class "dynaTree"
sens-method | Class "dynaTree"
sens-methods | Class "dynaTree"
sens.dynaTree | Monte Carlo Sensitivity Analysis for dynaTree Models
treestats | Class "dynaTree"
treestats-method | Class "dynaTree"
treestats-methods | Class "dynaTree"
treestats.dynaTree | Calculate the proportion of variables used in tree splits, and average summary stats of tree heights and leaf sizes
update.dynaTree | Updating a Dynamic Tree Model With New Data
varproptotal | Class "dynaTree"
varproptotal-method | Class "dynaTree"
varproptotal-methods | Class "dynaTree"
varproptotal.dynaTree | Calculate the proportion of variables used in tree splits, and average summary stats of tree heights and leaf sizes
varpropuse | Class "dynaTree"
varpropuse-method | Class "dynaTree"
varpropuse-methods | Class "dynaTree"
varpropuse.dynaTree | Calculate the proportion of variables used in tree splits, and average summary stats of tree heights and leaf sizes