R: Dyadic Mixed Model for Pedigree Data

# Dyadic Mixed Model for Pedigree Data

## Documentation for package ‘dmm’ version 2.1-9

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

dmm-package | Dyadic mixed model analysis for pedigree data
chartodec | Convert a vector from character to decimal numbers
condense.dmmarray | Condense an object of type 'dmmarray' to an object of type 'dmm'
condense.dmmblockarray | Condense an object of type 'dmmblockarray' to an object of type 'dmm'
csummary | Make summary tables of (co)variance component estimates sorted into class-specific classes for a dmm object.
csummary.dmm | Make summary tables of (co)variance component estimates sorted into class-specific classes for a dmm object.
dmm | Fit a dyadic mixed model to pedigree data
dmm.default | Fit a dyadic mixed model to pedigree data
dt8bal.df | A balanced dataset with eight individuals.
gprint | Generic function for printing genetic parameters contained in an object of class 'dmm'.
gprint.dmm | Print method for genetic parameters contained in an object of class 'dmm'.
gresponse | Compute response to selection, given phenotypic selection differentials.
gresponse.dmm | Compute response to selection, given phenotypic selection differentials.
gsummary | Make summary tables of genetic parameters for a dmm object
gsummary.dmm | Make summary tables of genetic parameters for a dmm object
harv101.df | Harvey dataset
make.countarray | Count the number of observations in a dataframe or an 'mdf' object for all traitpairs in the supplied list of traits.
make.ctable | Generates a list of vectors containing sets of variance component names
make.dmmobj | Construct an object of class 'dmm' from user-supplied data
mdf | Prepare a dataframe for use with dmm function
merino.df | Australian Merino sheep research dataset
pedcheck | Checks that the Id, SId, and DId columns of a dataframe are valid for function 'dmm()'.
pedrenum | Renumbers the Id, SId, and DId columns of a dataframe
plot.dmm | Plot residuals from fitting dyadic model
print.csummary.dmm | Print method for object of class 'csummary.dmm'.
print.dmm | Print method for a 'dmm()' fitted model object.
print.gresponse.dmm | Print method for object of class 'gresponse.dmm'.
print.gsummary.dmm | Print method for object of class 'gsummary.dmm'.
print.summary.dmm | Print method for an object of class 'summary.dmm'.
quercus.df | Quercus example dataset
sheep.df | Demonstration sheep dataset
summary.dmm | Make summary tables of (co)variance component estimates and fixed effect estimates for a dmm object.
summary.gresponse.dmm | Summary method for object of class 'gresponse.dmm'.
tstmo1.df | Dfreml example dataset
unfactor | Convert a vector from factor to numeric
warcolak.convert | Convert 'warcolak' data file to format required for a dataframe for 'dmm()' or 'mdf()'.