computeSmallWorldness	computeSmallWorldness
computeSurvivalPValueForGenePairSet.output	computeSurvivalPValueForGenePairSet.output
computeSurvivalPValueGenePairAll.output	computeSurvivalPValueGenePairAll.output
computeSurvivalPValueOneGenePair	computeSurvivalPValueOneGenePair
computeSurvivalPValueOneGenePair.output	computeSurvivalPValueOneGenePair.output
constructDesignMatrix	constructDesignMatrix
mutations	mutations
processDataMutSurv	processDataMutSurv
RNAi	RNAi
survival	survival
tested_pairs	tested_pairs
testMutationalPatternAll.wrapper	testMutationalPatternAll.wrapper
