R: Partitioning Beta Diversity into Turnover and Nestedness Components

# Partitioning Beta Diversity into Turnover and Nestedness Components

## Documentation for package ‘betapart’ version 1.6

- DESCRIPTION file.

## Help Pages

betapart-package | Partitioning beta diversity into turnover and nestedness components
bbs1980 | BBS data by state for two timeslices
bbs2000 | BBS data by state for two timeslices
bbsData | BBS data by state for two timeslices
beta.multi | Multiple-site dissimilarities
beta.multi.abund | Abundance-based multiple-site dissimilarities
beta.pair | Incidence-based pair-wise dissimilarities
beta.pair.abund | Abundance-based pair-wise dissimilarities
beta.para.control | Specifying Control Values for Internal Parallel Cluster
beta.sample | Resampling multiple-site dissimilarity for n sites
beta.sample.abund | Resampling abundance-based multiple-site dissimilarity for n sites
beta.temp | Temporal change in community composition
betapart | Partitioning beta diversity into turnover and nestedness components
betapart.core | Core calculations of betapart
betapart.core.abund | Core calculations of betapart for abundance-based dissimilarity measures
betatest | A data set of 4 communities, 107 species and a 4D functional space
boot.coefs.decay | Bootstrapping the parameters of distance-decay models computed with decay.model()
bray.part | Partitioning pair-wise Bray-Curtis dissimilarities
ceram.n | Cerambycidae from Northern European Countries
ceram.s | Cerambycidae from Southern European Countries
coords.n | Spatial coordinates for Southern European Countries
coords.s | Spatial coordinates for Southern European Countries
decay.model | Fitting distance decay models to pair-wise assemblage similarity
functional.beta.multi | Multiple-site functional dissimilarities
functional.beta.pair | Pair-wise functional dissimilarities
functional.betapart.core | Core calculations of functional dissimilarities metrics
functional.betapart.core.pairwise | functional.betapart.core.pairwise
inter_geom | Internal function to compute convexhull volume
inter_geom_coord | Internal function to compute convexhull volume and vertice coordinates
inter_rcdd | Internal function to compute convexhull volume
inter_rcdd_coord | Internal function to compute convexhull volume and vertice coordinates
phylo.beta.multi | Multiple-site phylogenetic dissimilarities
phylo.beta.pair | Pair-wise phylogenetic dissimilarities
phylo.betapart.core | Core calculations of phylogenetic dissimilarities metrics
plot.decay | Plotting distance decay curves from models computed with decay.model()
qhull.opt | Specifying control Values for convexhull volume estimation
zdep | Assessing the differences between parameters of two distance-decay models computed with decay.model().