R: 'anndata' for R

# 'anndata' for R

## Documentation for package ‘anndata’ version 0.7.5.6

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

anndata-package | anndata - Annotated Data
all.equal.AnnDataR6 | Test if two objects objects are equal
all.equal.LayersR6 | Test if two objects objects are equal
all.equal.RawR6 | Test if two objects objects are equal
AnnData | Create an Annotated Data Matrix
anndata | anndata - Annotated Data
AnnDataR6 | Create an Annotated Data Matrix
as.data.frame.AnnDataR6 | AnnData Helpers
as.matrix.AnnDataR6 | AnnData Helpers
as.matrix.RawR6 | Raw Helpers
concat | concat
dim.AnnDataR6 | AnnData Helpers
dim.RawR6 | Raw Helpers
dimnames.AnnDataR6 | AnnData Helpers
dimnames.RawR6 | Raw Helpers
dimnames<-.AnnDataR6 | AnnData Helpers
install_anndata | Install anndata
Layers | Create a Layers object
LayersR6 | Create a Layers object
length.LayersR6 | Layers Helpers
names.collections.abc.Mapping | Convert between Python and R objects
names.LayersR6 | Layers Helpers
py_to_r.anndata._core.aligned_mapping.LayersBase | Layers Helpers
py_to_r.anndata._core.anndata.AnnData | AnnData Helpers
py_to_r.anndata._core.raw.Raw | Raw Helpers
py_to_r.anndata._core.sparse_dataset.SparseDataset | AnnData Helpers
py_to_r.collections.abc.KeysView | Convert between Python and R objects
py_to_r.collections.abc.Mapping | Convert between Python and R objects
py_to_r.collections.abc.Set | Convert between Python and R objects
py_to_r.h5py._hl.dataset.Dataset | AnnData Helpers
py_to_r.pandas.core.indexes.base.Index | Convert between Python and R objects
r-py-conversion | Convert between Python and R objects
Raw | Create a Raw object
RawR6 | Create a Raw object
read_csv | read_csv
read_excel | read_excel
read_h5ad | read_h5ad
read_hdf | read_hdf
read_loom | read_loom
read_mtx | read_mtx
read_text | read_text
read_umi_tools | read_umi_tools
r_to_py.AnnDataR6 | AnnData Helpers
r_to_py.LayersR6 | Layers Helpers
r_to_py.RawR6 | Raw Helpers
t.AnnDataR6 | AnnData Helpers
write_csvs | Write annotation to .csv files.
write_h5ad | Write .h5ad-formatted hdf5 file.
write_loom | Write .loom-formatted hdf5 file.
[.AnnDataR6 | AnnData Helpers
[.collections.abc.Mapping | Convert between Python and R objects
[.LayersR6 | Layers Helpers
[.RawR6 | Raw Helpers
[<-.collections.abc.MutableMapping | Convert between Python and R objects
[<-.LayersR6 | Layers Helpers
[[.collections.abc.Mapping | Convert between Python and R objects
[[.LayersR6 | Layers Helpers
[[<-.collections.abc.MutableMapping | Convert between Python and R objects
[[<-.LayersR6 | Layers Helpers