R: Summarise Patient-Level Drug Utilisation in Data Mapped to the OMOP Common Data Model

# Summarise Patient-Level Drug Utilisation in Data Mapped to the OMOP Common Data Model

## Documentation for package ‘DrugUtilisation’ version 0.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

addDailyDose | add daily dose information to a drug_exposure table
addDrugUse | Add new columns with drug use related information
addIndication | Get indication for a target cohort
addRoute | add route column to a table containing drug_exposure information
benchmarkDUS | Run benchmark of drug utilisation cohort generation
dailyDoseCoverage | Check coverage of daily dose computation in a sample of the cdm for selected concept sets and ingredient
generateAtcCohortSet | Generates a cohort of the drug use of ATC name(s) of interest.
generateDrugUtilisationCohortSet | Generates a cohort of the drug use of a certain list of concepts.
generateIngredientCohortSet | Generates a cohort of the drug use of ingredient name(s) of interest.
indicationToStrata | Create new variables summarising the data of indication that can be used as stratification columns
mockDrugUtilisation | It creates a mock database for testing drugutilisation package
patternsWithFormula | Patterns valid to compute daily dose with the associated formula.
patternTable | Function to create a tibble with the patterns from current drug strength table
readConceptList | Get concept ids from a provided path to json files
stratifyByUnit | Function to stratify a conceptSet by unit
summariseDrugUse | This function is used to summarise the dose table over multiple cohorts.
summariseIndication | This function is used to summarise the indication table over multiple cohorts.
summariseTreatmentFromCohort | This function is used to summarise the dose table over multiple cohorts.
summariseTreatmentFromConceptSet | This function is used to summarise the dose table over multiple cohorts.