R: Automated Cleaning of Occurrence Records from Biological Collections

# Automated Cleaning of Occurrence Records from Biological Collections

## Documentation for package ‘CoordinateCleaner’ version 3.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

aohi | Artificial Hotspot Occurrence Inventory
buffland | Global Coastlines buffered by 1 degree
buffsea | Global Coastlines buffered by -1 degree
cc_aohi | Identify Coordinates in Artificial Hotspot Occurrence Inventory
cc_cap | Identify Coordinates in Vicinity of Country Capitals.
cc_cen | Identify Coordinates in Vicinity of Country and Province Centroids
cc_coun | Identify Coordinates Outside their Reported Country
cc_dupl | Identify Duplicated Records
cc_equ | Identify Records with Identical lat/lon
cc_gbif | Identify Records Assigned to GBIF Headquarters
cc_inst | Identify Records in the Vicinity of Biodiversity Institutions
cc_iucn | Identify Records Outside Natural Ranges
cc_outl | Identify Geographic Outliers in Species Distributions
cc_sea | Identify Non-terrestrial Coordinates
cc_urb | Identify Records Inside Urban Areas
cc_val | Identify Invalid lat/lon Coordinates
cc_zero | Identify Zero Coordinates
cd_ddmm | Identify Datasets with a Degree Conversion Error
cd_round | Identify Datasets with Rasterized Coordinates
cf_age | Identify Fossils with Outlier Age
cf_equal | Identify Fossils with equal min and max age
cf_outl | Identify Outlier Records in Space and Time
cf_range | Identify Fossils with Extreme Age Ranges
clean_coordinates | Geographic Cleaning of Coordinates from Biologic Collections
clean_dataset | Coordinate Cleaning using Dataset Properties
clean_fossils | Geographic and Temporal Cleaning of Records from Fossil Collections
countryref | Country Centroids and Country Capitals
institutions | Global Locations of Biodiversity Institutions
is.spatialvalid | Check spatialvalid object
pbdb_example | Example data from the Paleobiologydatabase
plot.spatialvalid | Plot Method for Class Spatialvalid
summary.spatialvalid | Geographic Cleaning of Coordinates from Biologic Collections
write_pyrate | Create Input Files for PyRate