R: Classes and Methods for "Class Discovery" with Microarrays or Proteomics

# Classes and Methods for "Class Discovery" with Microarrays or Proteomics

## Documentation for package ‘ClassDiscovery’ version 3.4.5

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

aspectHeatmap | Heatmap with control over the aspect ratio
BootstrapClusterTest | Class "BootstrapClusterTest"
BootstrapClusterTest-class | Class "BootstrapClusterTest"
cluster3 | Cluster a Dataset Three Ways
ClusterTest | Class "ClusterTest"
ClusterTest-class | Class "ClusterTest"
cutHclust | Get the List of Classes From A Clustering Algorithm
cutKmeans | Get the List of Classes From A Clustering Algorithm
cutPam | Get the List of Classes From A Clustering Algorithm
cutRepeatedKmeans | Get the List of Classes From A Clustering Algorithm
distanceMatrix | Distance Matrix Computation
GenePCA | Class "GenePCA"
GenePCA-class | Class "GenePCA"
hclust-class | Class "hclust"
hist-method | Class "ClusterTest"
identify-method | Class "SamplePCA"
image-method | Class "ClusterTest"
mahalanobisQC | Using Mahalanobis Distance and PCA for Quality Control
Mosaic | Class "Mosaic"
Mosaic-class | Class "Mosaic"
PCanova | Class "PCanova"
PCanova-class | Class "PCanova"
pcc | Plot Dendrograms with Color-Coded Labels
PerturbationClusterTest | The PerturbationClusterTest Class
PerturbationClusterTest-class | The PerturbationClusterTest Class
plot-method | Class "SamplePCA"
plot-method | Class "GenePCA"
plot-method | Class "Mosaic"
plot-method | Class "PCanova"
plotColoredClusters | Plot Dendrograms with Color-Coded Labels
pltree-method | Class "Mosaic"
pltree-method | Class "PCanova"
predict-method | Class "SamplePCA"
repeatedKmeans | Get the List of Classes From A Clustering Algorithm
SamplePCA | Class "SamplePCA"
SamplePCA-class | Class "SamplePCA"
screeplot-method | Class "SamplePCA"
summary-method | Class "ClusterTest"
summary-method | Class "BootstrapClusterTest"
summary-method | The PerturbationClusterTest Class
summary-method | Class "SamplePCA"
summary-method | Class "Mosaic"
summary-method | Class "PCanova"
text-method | Class "SamplePCA"